ReactionMethods::ReactionAlgorithm Member List

This is the complete list of members for ReactionMethods::ReactionAlgorithm, including all inherited members.

add_reaction(std::shared_ptr< SingleReaction > const &new_reaction)	ReactionMethods::ReactionAlgorithm
all_reactant_particles_exist(SingleReaction const &current_reaction) const	ReactionMethods::ReactionAlgorithm	protected
calculate_potential_energy() const	ReactionMethods::ReactionAlgorithm
charges_of_types	ReactionMethods::ReactionAlgorithm
clear_old_system_state()	ReactionMethods::ReactionAlgorithm	inlineprotected
create_new_trial_state(int reaction_id)	ReactionMethods::ReactionAlgorithm
delete_particle(int p_id)	ReactionMethods::ReactionAlgorithm
delete_reaction(int reaction_id)	ReactionMethods::ReactionAlgorithm	inline
displacement_mc_move(int type, int n_particles)	ReactionMethods::ReactionAlgorithm	protected
exclusion_radius_per_type	ReactionMethods::ReactionAlgorithm
exclusion_range	ReactionMethods::ReactionAlgorithm
get_acceptance_rate_configurational_moves() const	ReactionMethods::ReactionAlgorithm	inline
get_exclusion_range() const	ReactionMethods::ReactionAlgorithm	inline
get_kT() const	ReactionMethods::ReactionAlgorithm	inline
get_old_system_state() const	ReactionMethods::ReactionAlgorithm	inline
get_random_position_in_box()	ReactionMethods::ReactionAlgorithm	protected
get_slab_constraint_parameters() const	ReactionMethods::ReactionAlgorithm	inline
get_volume() const	ReactionMethods::ReactionAlgorithm	inline
i_random(int maxint)	ReactionMethods::ReactionAlgorithm	inline
is_reaction_under_way() const	ReactionMethods::ReactionAlgorithm	inline
kT	ReactionMethods::ReactionAlgorithm
m_accepted_configurational_MC_moves	ReactionMethods::ReactionAlgorithm
m_empty_p_ids_smaller_than_max_seen_particle	ReactionMethods::ReactionAlgorithm	protected
m_system_changes	ReactionMethods::ReactionAlgorithm	protected
m_tried_configurational_MC_moves	ReactionMethods::ReactionAlgorithm
make_displacement_mc_move_attempt(int type, int n_particles)	ReactionMethods::ReactionAlgorithm
make_new_system_state()	ReactionMethods::ReactionAlgorithm	inlineprotected
make_reaction_attempt(::ReactionMethods::SingleReaction const &reaction, ParticleChanges &bookkeeping)	ReactionMethods::ReactionAlgorithm	protected
make_reaction_mc_move_attempt(int reaction_id, double bf, double E_pot_old, double E_pot_new)	ReactionMethods::ReactionAlgorithm
neighbor_search_order_n	ReactionMethods::ReactionAlgorithm
non_interacting_type	ReactionMethods::ReactionAlgorithm
particle_inside_exclusion_range_touched	ReactionMethods::ReactionAlgorithm
ReactionAlgorithm(boost::mpi::communicator const &comm, int seed, double kT, double exclusion_range, std::unordered_map< int, double > const &exclusion_radius_per_type)	ReactionMethods::ReactionAlgorithm	inline
reactions	ReactionMethods::ReactionAlgorithm
remove_constraint()	ReactionMethods::ReactionAlgorithm	inline
restore_old_system_state()	ReactionMethods::ReactionAlgorithm	protected
set_cyl_constraint(double center_x, double center_y, double radius)	ReactionMethods::ReactionAlgorithm
set_exclusion_radius_per_type(std::unordered_map< int, double > const &map)	ReactionMethods::ReactionAlgorithm	inline
set_slab_constraint(double slab_start_z, double slab_end_z)	ReactionMethods::ReactionAlgorithm
set_volume(double new_volume)	ReactionMethods::ReactionAlgorithm	inline
setup_bookkeeping_of_empty_pids()	ReactionMethods::ReactionAlgorithm
update_volume()	ReactionMethods::ReactionAlgorithm
volume	ReactionMethods::ReactionAlgorithm
~ReactionAlgorithm()=default	ReactionMethods::ReactionAlgorithm	virtual